IL_7OIG_123

3D structure

PDB id

7OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

7OIG|1|2|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OIG_123 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.1252

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

7OIG|1|2|G|147
7OIG|1|2|G|148
7OIG|1|2|A|149
7OIG|1|2|U|150
7OIG|1|2|A|151
7OIG|1|2|A|152
7OIG|1|2|C|153
*
7OIG|1|2|G|168
7OIG|1|2|C|169
7OIG|1|2|U|170
7OIG|1|2|A|171
7OIG|1|2|A|172
7OIG|1|2|U|173
7OIG|1|2|A|174
7OIG|1|2|C|175

Current chains

Chain 2

16S rRNA

Nearby chains

Chain x

30S ribosomal protein S20