IL_7OIG_182
3D structure
- PDB id
- 7OIG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CspA-27 cotranslational folding intermediate 3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAUGGUAG*CGAGAGUAG
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OIG_182 not in the Motif Atlas
- Homologous match to IL_5J7L_359
- Geometric discrepancy: 0.0804
- The information below is about IL_5J7L_359
- Detailed Annotation
- Bacterial 5S Loop E
- Broad Annotation
- Loop E
- Motif group
- IL_56455.6
- Basepair signature
- cWW-tSH-tHW-L-R-L-R-L-R-tWH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
7OIG|1|3|C|71
7OIG|1|3|G|72
7OIG|1|3|A|73
7OIG|1|3|U|74
7OIG|1|3|G|75
7OIG|1|3|G|76
7OIG|1|3|U|77
7OIG|1|3|A|78
7OIG|1|3|G|79
*
7OIG|1|3|C|97
7OIG|1|3|G|98
7OIG|1|3|A|99
7OIG|1|3|G|100
7OIG|1|3|A|101
7OIG|1|3|G|102
7OIG|1|3|U|103
7OIG|1|3|A|104
7OIG|1|3|G|105
Current chains
- Chain 3
- 5S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain L
- 50S ribosomal protein L16
- Chain U
- 50S ribosomal protein L25
- Chain Y
- 50S ribosomal protein L30
Coloring options: