IL_7OIG_184

3D structure

PDB id

7OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GACG*CGUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OIG_184 not in the Motif Atlas

Geometric match to IL_4XW1_002

Geometric discrepancy: 0.3561

The information below is about IL_4XW1_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_77658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

34

Unit IDs

7OIG|1|1|G|1168
7OIG|1|1|A|1169
7OIG|1|1|C|1170
7OIG|1|1|G|1171
*
7OIG|1|1|C|1178
7OIG|1|1|G|1179
7OIG|1|1|U|1180
7OIG|1|1|U|1181

Current chains

Chain 1

23S rRNA

Nearby chains