IL_7OII_122

3D structure

PDB id

7OII (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-70 cotranslational folding intermediate 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

7OII|1|2|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OII_122 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.1438

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

7OII|1|2|G|147
7OII|1|2|G|148
7OII|1|2|A|149
7OII|1|2|U|150
7OII|1|2|A|151
7OII|1|2|A|152
7OII|1|2|C|153
*
7OII|1|2|G|168
7OII|1|2|C|169
7OII|1|2|U|170
7OII|1|2|A|171
7OII|1|2|A|172
7OII|1|2|U|173
7OII|1|2|A|174
7OII|1|2|C|175

Current chains

Chain 2

16S rRNA

Nearby chains

Chain x

30S ribosomal protein S20