3D structure

PDB id
7OII (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-70 cotranslational folding intermediate 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
UUAAUUGAUG*UUGAUCGAAG
Length
20 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OII_187 not in the Motif Atlas
Homologous match to IL_5J7L_387
Geometric discrepancy: 0.0665
The information below is about IL_5J7L_387
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_61249.1
Basepair signature
cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW
Number of instances in this motif group
1

Unit IDs

7OII|1|1|U|1851
7OII|1|1|U|1852
7OII|1|1|A|1853
7OII|1|1|A|1854
7OII|1|1|U|1855
7OII|1|1|U|1856
7OII|1|1|G|1857
7OII|1|1|A|1858
7OII|1|1|U|1859
7OII|1|1|G|1860
*
7OII|1|1|U|1882
7OII|1|1|U|1883
7OII|1|1|G|1884
7OII|1|1|A|1885
7OII|1|1|U|1886
7OII|1|1|C|1887
7OII|1|1|G|1888
7OII|1|1|A|1889
7OII|1|1|A|1890
7OII|1|1|G|1891

Current chains

Chain 1
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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