IL_7OLC_083
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGUAAC*GGAAAAG
- Length
- 13 nucleotides
- Bulged bases
- 7OLC|1|1|A|1911
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLC_083 not in the Motif Atlas
- Homologous match to IL_8C3A_084
- Geometric discrepancy: 0.1085
- The information below is about IL_8C3A_084
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65969.4
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
7OLC|1|1|C|1898
7OLC|1|1|G|1899
7OLC|1|1|U|1900
7OLC|1|1|A|1901
7OLC|1|1|A|1902
7OLC|1|1|C|1903
*
7OLC|1|1|G|1908
7OLC|1|1|G|1909
7OLC|1|1|A|1910
7OLC|1|1|A|1911
7OLC|1|1|A|1912
7OLC|1|1|A|1913
7OLC|1|1|G|1914
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain Ln
- 60S ribosomal protein L41-A
- Chain Lp
- 60S ribosomal protein L43-like protein
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