IL_7OLC_093
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCAAAGU*AACCAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLC_093 not in the Motif Atlas
- Homologous match to IL_5TBW_088
- Geometric discrepancy: 0.1382
- The information below is about IL_5TBW_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36973.8
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7OLC|1|1|U|2174
7OLC|1|1|C|2175
7OLC|1|1|A|2176
7OLC|1|1|A|2177
7OLC|1|1|A|2178
7OLC|1|1|G|2179
7OLC|1|1|U|2180
*
7OLC|1|1|A|2191
7OLC|1|1|A|2192
7OLC|1|1|C|2193
7OLC|1|1|C|2194
7OLC|1|1|A|2195
7OLC|1|1|A|2196
7OLC|1|1|G|2197
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LA
- 60S ribosomal protein L2-like protein
- Chain Li
- 60S ribosomal protein L36
- Chain Lo
- 60S ribosomal protein L44-like protein
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