IL_7OLC_095
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCAAAUGCCUCG*CGCG
- Length
- 16 nucleotides
- Bulged bases
- 7OLC|1|1|A|2244, 7OLC|1|1|C|2250, 7OLC|1|1|C|2269
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLC_095 not in the Motif Atlas
- Homologous match to IL_5TBW_090
- Geometric discrepancy: 0.1041
- The information below is about IL_5TBW_090
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_66080.1
- Basepair signature
- cWW-cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7OLC|1|1|C|2240
7OLC|1|1|C|2241
7OLC|1|1|A|2242
7OLC|1|1|A|2243
7OLC|1|1|A|2244
7OLC|1|1|U|2245
7OLC|1|1|G|2246
7OLC|1|1|C|2247
7OLC|1|1|C|2248
7OLC|1|1|U|2249
7OLC|1|1|C|2250
7OLC|1|1|G|2251
*
7OLC|1|1|C|2267
7OLC|1|1|G|2268
7OLC|1|1|C|2269
7OLC|1|1|G|2270
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain Ln
- 60S ribosomal protein L41-A
Coloring options: