IL_7OLC_242
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAUGUGG*UGUUAUAGC
- Length
- 17 nucleotides
- Bulged bases
- 7OLC|1|1|U|526, 7OLC|1|1|U|548
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLC_242 not in the Motif Atlas
- Homologous match to IL_8C3A_022
- Geometric discrepancy: 0.1301
- The information below is about IL_8C3A_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_07703.1
- Basepair signature
- cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OLC|1|1|G|523
7OLC|1|1|A|524
7OLC|1|1|A|525
7OLC|1|1|U|526
7OLC|1|1|G|527
7OLC|1|1|U|528
7OLC|1|1|G|529
7OLC|1|1|G|530
*
7OLC|1|1|U|543
7OLC|1|1|G|544
7OLC|1|1|U|545
7OLC|1|1|U|546
7OLC|1|1|A|547
7OLC|1|1|U|548
7OLC|1|1|A|549
7OLC|1|1|G|550
7OLC|1|1|C|551
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LM
- 60S ribosomal protein L14-like protein
- Chain LS
- 60S ribosomal protein L20
Coloring options: