IL_7OLC_255
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGACGAAG*UCGAAC
- Length
- 15 nucleotides
- Bulged bases
- 7OLC|1|1|C|1374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLC_255 not in the Motif Atlas
- Geometric match to IL_6HCT_001
- Geometric discrepancy: 0.2945
- The information below is about IL_6HCT_001
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_74205.1
- Basepair signature
- cWW-cWW-tSS-tSH-L-tHS-R-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7OLC|1|1|G|1370
7OLC|1|1|U|1371
7OLC|1|1|G|1372
7OLC|1|1|A|1373
7OLC|1|1|C|1374
7OLC|1|1|G|1375
7OLC|1|1|A|1376
7OLC|1|1|A|1377
7OLC|1|1|G|1378
*
7OLC|1|1|U|1398
7OLC|1|1|C|1399
7OLC|1|1|G|1400
7OLC|1|1|A|1401
7OLC|1|1|A|1402
7OLC|1|1|C|1403
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LC
- 60S ribosomal protein L4-like protein
- Chain LP
- 60S ribosomal protein l17-like protein
- Chain LY
- 60S ribosomal protein L26-like protein
- Chain Le
- 60S ribosomal protein L32-like protein
- Chain Lq
- Putative 60S ribosomal protein
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