IL_7OLD_073
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUUGC*GGAAUA
- Length
- 11 nucleotides
- Bulged bases
- 7OLD|1|1|U|1609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLD_073 not in the Motif Atlas
- Geometric match to IL_5TBW_066
- Geometric discrepancy: 0.2707
- The information below is about IL_5TBW_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48431.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OLD|1|1|U|1607
7OLD|1|1|U|1608
7OLD|1|1|U|1609
7OLD|1|1|G|1610
7OLD|1|1|C|1611
*
7OLD|1|1|G|1791
7OLD|1|1|G|1792
7OLD|1|1|A|1793
7OLD|1|1|A|1794
7OLD|1|1|U|1795
7OLD|1|1|A|1796
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LZ
- 60S ribosomal protein L27
- Chain Lr
- 60S ribosomal protein L41-A
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