IL_7OLD_079
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUAAC*GGAAGA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLD_079 not in the Motif Atlas
- Homologous match to IL_8C3A_077
- Geometric discrepancy: 0.1274
- The information below is about IL_8C3A_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69313.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OLD|1|1|U|1674
7OLD|1|1|U|1675
7OLD|1|1|A|1676
7OLD|1|1|A|1677
7OLD|1|1|C|1678
*
7OLD|1|1|G|1727
7OLD|1|1|G|1728
7OLD|1|1|A|1729
7OLD|1|1|A|1730
7OLD|1|1|G|1731
7OLD|1|1|A|1732
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain Lg
- Ribosomal protein l34-like protein
- Chain Lk
- 60S ribosomal protein L38-like protein
Coloring options: