IL_7OLD_129
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUUUUG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 7OLD|1|1|U|3014, 7OLD|1|1|U|3016
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLD_129 not in the Motif Atlas
- Homologous match to IL_5TBW_118
- Geometric discrepancy: 0.1151
- The information below is about IL_5TBW_118
- Detailed Annotation
- UAA/GAN related
- Broad Annotation
- UAA/GAN related
- Motif group
- IL_17136.4
- Basepair signature
- cWW-R-L-tHS-tHW-cWW
- Number of instances in this motif group
- 18
Unit IDs
7OLD|1|1|U|3012
7OLD|1|1|U|3013
7OLD|1|1|U|3014
7OLD|1|1|U|3015
7OLD|1|1|U|3016
7OLD|1|1|G|3017
*
7OLD|1|1|C|3042
7OLD|1|1|G|3043
7OLD|1|1|A|3044
7OLD|1|1|A|3045
7OLD|1|1|G|3046
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3-like protein
- Chain LW
- 60S ribosomal protein L24-like protein
- Chain Ld
- Putative 60S ribosomal protein
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