IL_7OLD_131
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AUAAU*AGAAU
- Length
- 10 nucleotides
- Bulged bases
- 7OLD|1|1|A|3088
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLD_131 not in the Motif Atlas
- Homologous match to IL_8C3A_129
- Geometric discrepancy: 0.1507
- The information below is about IL_8C3A_129
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
7OLD|1|1|A|3061
7OLD|1|1|U|3062
7OLD|1|1|A|3063
7OLD|1|1|A|3064
7OLD|1|1|U|3065
*
7OLD|1|1|A|3085
7OLD|1|1|G|3086
7OLD|1|1|A|3087
7OLD|1|1|A|3088
7OLD|1|1|U|3089
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LH
- 60S ribosomal protein l9-like protein
- Chain LO
- 60S ribosomal protein L16-like protein
- Chain Lm
- Ubiquitin
Coloring options: