IL_7OLD_133

3D structure

PDB id

7OLD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGUU*ACG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OLD_133 not in the Motif Atlas

Geometric match to IL_6CZR_136

Geometric discrepancy: 0.3927

The information below is about IL_6CZR_136

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05564.3

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

14

Unit IDs

7OLD|1|1|C|3120
7OLD|1|1|G|3121
7OLD|1|1|U|3122
7OLD|1|1|U|3123
*
7OLD|1|1|A|3223
7OLD|1|1|C|3224
7OLD|1|1|G|3225

Current chains

Chain 1

26S rRNA

Nearby chains

Chain Lf

60S ribosomal protein l33-like protein