IL_7OLD_158
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGAC*GAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLD_158 not in the Motif Atlas
- Homologous match to IL_4V88_396
- Geometric discrepancy: 0.2076
- The information below is about IL_4V88_396
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.12
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 35
Unit IDs
7OLD|1|2|C|183
7OLD|1|2|G|184
7OLD|1|2|A|185
7OLD|1|2|C|186
*
7OLD|1|2|G|191
7OLD|1|2|A|192
7OLD|1|2|A|193
7OLD|1|2|G|194
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SI
- 40S ribosomal protein S8
Coloring options: