IL_7OLD_159
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUA*UUCUC
- Length
- 8 nucleotides
- Bulged bases
- 7OLD|1|2|U|257, 7OLD|1|2|C|258
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLD_159 not in the Motif Atlas
- Geometric match to IL_5B2P_002
- Geometric discrepancy: 0.3016
- The information below is about IL_5B2P_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_71625.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 79
Unit IDs
7OLD|1|2|G|199
7OLD|1|2|U|200
7OLD|1|2|A|201
*
7OLD|1|2|U|256
7OLD|1|2|U|257
7OLD|1|2|C|258
7OLD|1|2|U|259
7OLD|1|2|C|260
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SE
- 40S ribosomal protein S4
- Chain SI
- 40S ribosomal protein S8
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