IL_7OLD_186
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAACAAAUU*ACAUUAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLD_186 not in the Motif Atlas
- Homologous match to IL_4V88_425
- Geometric discrepancy: 0.2696
- The information below is about IL_4V88_425
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_53064.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7OLD|1|2|G|750
7OLD|1|2|A|751
7OLD|1|2|A|752
7OLD|1|2|C|753
7OLD|1|2|A|754
7OLD|1|2|A|755
7OLD|1|2|A|756
7OLD|1|2|U|757
7OLD|1|2|U|758
*
7OLD|1|2|A|789
7OLD|1|2|C|790
7OLD|1|2|A|791
7OLD|1|2|U|792
7OLD|1|2|U|793
7OLD|1|2|A|794
7OLD|1|2|G|795
7OLD|1|2|C|796
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SE
- 40S ribosomal protein S4
- Chain SJ
- 40S ribosomal protein s9-like protein
- Chain SL
- 40S ribosomal protein S11-like protein
- Chain SW
- 40S ribosomal protein S22-like protein
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