IL_7OLD_206
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AUGAGGAUUG*CUUGAUUU
- Length
- 18 nucleotides
- Bulged bases
- 7OLD|1|2|G|1225, 7OLD|1|2|U|1254
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLD_206 not in the Motif Atlas
- Homologous match to IL_4V88_447
- Geometric discrepancy: 0.4838
- The information below is about IL_4V88_447
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_34780.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
7OLD|1|2|A|1221
7OLD|1|2|U|1222
7OLD|1|2|G|1223
7OLD|1|2|A|1224
7OLD|1|2|G|1225
7OLD|1|2|G|1226
7OLD|1|2|A|1227
7OLD|1|2|U|1228
7OLD|1|2|U|1229
7OLD|1|2|G|1230
*
7OLD|1|2|C|1249
7OLD|1|2|U|1250
7OLD|1|2|U|1251
7OLD|1|2|G|1252
7OLD|1|2|A|1253
7OLD|1|2|U|1254
7OLD|1|2|U|1255
7OLD|1|2|U|1256
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SK
- 40S ribosomal protein s10-like protein
- Chain SM
- 40S ribosomal protein S12
- Chain Sd
- Ribosomal protein uS14
- Chain Sf
- 40S ribosomal protein S27a-like protein
Coloring options: