IL_7OLD_211
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 7OLD|1|2|A|1423
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLD_211 not in the Motif Atlas
- Homologous match to IL_4V88_452
- Geometric discrepancy: 0.1854
- The information below is about IL_4V88_452
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
7OLD|1|2|C|1277
7OLD|1|2|G|1278
*
7OLD|1|2|C|1422
7OLD|1|2|A|1423
7OLD|1|2|G|1424
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain B
- HABP4_PAI-RBP1 domain-containing protein
- Chain SC
- 40S ribosomal protein S2-like protein
- Chain SD
- 40S ribosomal protein S3-like protein
- Chain SQ
- 40S ribosomal protein S16-like protein
- Chain SU
- 40S ribosomal protein S20-like protein
- Chain Sd
- Ribosomal protein uS14
Coloring options: