IL_7OLD_256
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGCU*GAUCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OLD_256 not in the Motif Atlas
- Homologous match to IL_8C3A_111
- Geometric discrepancy: 0.1411
- The information below is about IL_8C3A_111
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50458.1
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
7OLD|1|1|G|2782
7OLD|1|1|G|2783
7OLD|1|1|C|2784
7OLD|1|1|U|2785
*
7OLD|1|1|G|2822
7OLD|1|1|A|2823
7OLD|1|1|U|2824
7OLD|1|1|C|2825
7OLD|1|1|C|2826
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LI
- 60S ribosomal protein L10-like protein
- Chain Lb
- 60S ribosomal protein L29
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