IL_7OOD_037

3D structure

PDB id

7OOD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUAAAACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

7OOD|1|3|A|1081

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OOD|1|3|C|1078
7OOD|1|3|U|1079
7OOD|1|3|A|1080
7OOD|1|3|A|1081
7OOD|1|3|A|1082
7OOD|1|3|A|1083
7OOD|1|3|C|1084
7OOD|1|3|A|1085
7OOD|1|3|G|1086
7OOD|1|3|C|1087
*
7OOD|1|3|G|1142
7OOD|1|3|U|1143
7OOD|1|3|C|1144
7OOD|1|3|G|1145
7OOD|1|3|A|1146
7OOD|1|3|G|1147

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L36

Chain e

50S ribosomal protein L6

Chain g

50S ribosomal protein L10