IL_7OOD_083

3D structure

PDB id

7OOD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGAG*CGAAAGGUGGAAUAC

Length

19 nucleotides

Bulged bases

7OOD|1|3|A|2170

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OOD|1|3|G|2131
7OOD|1|3|G|2132
7OOD|1|3|A|2133
7OOD|1|3|G|2134
*
7OOD|1|3|C|2168
7OOD|1|3|G|2169
7OOD|1|3|A|2170
7OOD|1|3|A|2171
7OOD|1|3|A|2172
7OOD|1|3|G|2173
7OOD|1|3|G|2174
7OOD|1|3|U|2175
7OOD|1|3|G|2176
7OOD|1|3|G|2177
7OOD|1|3|A|2178
7OOD|1|3|A|2179
7OOD|1|3|U|2180
7OOD|1|3|A|2181
7OOD|1|3|C|2182

Current chains

Chain 3

23S ribosomal RNA

Nearby chains