IL_7OOD_099

3D structure

PDB id

7OOD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUGAAG*CAAAGAUUAA

Length

16 nucleotides

Bulged bases

7OOD|1|3|U|2788

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OOD|1|3|U|2644
7OOD|1|3|U|2645
7OOD|1|3|G|2646
7OOD|1|3|A|2647
7OOD|1|3|A|2648
7OOD|1|3|G|2649
*
7OOD|1|3|C|2781
7OOD|1|3|A|2782
7OOD|1|3|A|2783
7OOD|1|3|A|2784
7OOD|1|3|G|2785
7OOD|1|3|A|2786
7OOD|1|3|U|2787
7OOD|1|3|U|2788
7OOD|1|3|A|2789
7OOD|1|3|A|2790

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain b

50S ribosomal protein L3

Chain i

50S ribosomal protein L13