IL_7OOD_116

3D structure

PDB id

7OOD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AGUUGAAGUCA*UGGUGGAU

Length

19 nucleotides

Bulged bases

7OOD|1|3|U|1241

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OOD|1|3|A|1238
7OOD|1|3|G|1239
7OOD|1|3|U|1240
7OOD|1|3|U|1241
7OOD|1|3|G|1242
7OOD|1|3|A|1243
7OOD|1|3|A|1244
7OOD|1|3|G|1245
7OOD|1|3|U|1246
7OOD|1|3|C|1247
7OOD|1|3|A|1248
*
7OOD|1|3|U|1261
7OOD|1|3|G|1262
7OOD|1|3|G|1263
7OOD|1|3|U|1264
7OOD|1|3|G|1265
7OOD|1|3|G|1266
7OOD|1|3|A|1267
7OOD|1|3|U|1268

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain p

50S ribosomal protein L20

Chain r

50S ribosomal protein L22