IL_7OPE_100
3D structure
- PDB id
- 7OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 7OPE|1|A|G|2809
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OPE_100 not in the Motif Atlas
- Homologous match to IL_7RQB_102
- Geometric discrepancy: 0.1018
- The information below is about IL_7RQB_102
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.1
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7OPE|1|A|U|2665
7OPE|1|A|U|2666
7OPE|1|A|G|2667
7OPE|1|A|A|2668
7OPE|1|A|G|2669
*
7OPE|1|A|C|2803
7OPE|1|A|A|2804
7OPE|1|A|A|2805
7OPE|1|A|G|2806
7OPE|1|A|A|2807
7OPE|1|A|U|2808
7OPE|1|A|G|2809
7OPE|1|A|A|2810
7OPE|1|A|G|2811
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain F
- 50S ribosomal protein L3
- Chain N
- 50S ribosomal protein L13
Coloring options: