IL_7OPE_101
3D structure
- PDB id
- 7OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OPE_101 not in the Motif Atlas
- Geometric match to IL_5J7L_346
- Geometric discrepancy: 0.0878
- The information below is about IL_5J7L_346
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.4
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7OPE|1|A|U|2681
7OPE|1|A|U|2682
7OPE|1|A|A|2683
7OPE|1|A|G|2684
7OPE|1|A|U|2685
7OPE|1|A|A|2686
7OPE|1|A|C|2687
*
7OPE|1|A|G|2692
7OPE|1|A|G|2693
7OPE|1|A|A|2694
7OPE|1|A|C|2695
7OPE|1|A|C|2696
7OPE|1|A|G|2697
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain I
- 50S ribosomal protein L6
Coloring options: