IL_7OPE_103
3D structure
- PDB id
- 7OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGUAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 7OPE|1|A|U|2718, 7OPE|1|A|A|2719
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OPE_103 not in the Motif Atlas
- Homologous match to IL_4WF9_102
- Geometric discrepancy: 0.0845
- The information below is about IL_4WF9_102
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_82016.1
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
7OPE|1|A|U|2716
7OPE|1|A|G|2717
7OPE|1|A|U|2718
7OPE|1|A|A|2719
7OPE|1|A|C|2720
*
7OPE|1|A|G|2747
7OPE|1|A|G|2748
7OPE|1|A|U|2749
7OPE|1|A|A|2750
7OPE|1|A|G|2751
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain F
- 50S ribosomal protein L3
- Chain R
- 50S ribosomal protein L17
- Chain T
- 50S ribosomal protein L19
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