IL_7OSA_014
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UAGAUAAAAAG*CAUA
- Length
- 15 nucleotides
- Bulged bases
- 7OSA|1|18S|A|217
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_014 not in the Motif Atlas
- Geometric match to IL_3NPQ_006
- Geometric discrepancy: 0.3117
- The information below is about IL_3NPQ_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_96332.5
- Basepair signature
- cWW-cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 7
Unit IDs
7OSA|1|18S|U|212
7OSA|1|18S|A|213
7OSA|1|18S|G|214
7OSA|1|18S|A|215
7OSA|1|18S|U|216
7OSA|1|18S|A|217
7OSA|1|18S|A|218
7OSA|1|18S|A|219
7OSA|1|18S|A|220
7OSA|1|18S|A|221
7OSA|1|18S|G|243
*
7OSA|1|18S|C|250
7OSA|1|18S|A|251
7OSA|1|18S|U|252
7OSA|1|18S|A|253
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS4
- 40S ribosomal protein S4
- Chain eS6
- 40S ribosomal protein S6
- Chain eS8
- 40S ribosomal protein S8
- Chain uS17
- 40S ribosomal protein S11-B
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