IL_7OSA_020

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGG*CGAUUC

Length

9 nucleotides

Bulged bases

7OSA|1|18S|U|380

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_020 not in the Motif Atlas

Homologous match to IL_8C3A_412

Geometric discrepancy: 0.0995

The information below is about IL_8C3A_412

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49054.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

2

Unit IDs

7OSA|1|18S|G|363
7OSA|1|18S|G|364
7OSA|1|18S|G|365
*
7OSA|1|18S|C|376
7OSA|1|18S|G|377
7OSA|1|18S|A|378
7OSA|1|18S|U|379
7OSA|1|18S|U|380
7OSA|1|18S|C|381

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS4

40S ribosomal protein S4

Chain uS12

40S ribosomal protein S23

Chain uS4

BJ4_G0026100.mRNA.1.CDS.1