IL_7OSA_026

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UACA*UUAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_026 not in the Motif Atlas

Geometric match to IL_6YL5_010

Geometric discrepancy: 0.2839

The information below is about IL_6YL5_010

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

7OSA|1|18S|U|517
7OSA|1|18S|A|518
7OSA|1|18S|C|519
7OSA|1|18S|A|520
*
7OSA|1|18S|U|532
7OSA|1|18S|U|533
7OSA|1|18S|A|534
7OSA|1|18S|A|535

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS24

40S ribosomal protein S24

Chain uS4

BJ4_G0026100.mRNA.1.CDS.1