IL_7OSA_030

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUUAAAA*UC

Length

9 nucleotides

Bulged bases

7OSA|1|18S|A|619

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_030 not in the Motif Atlas

Homologous match to IL_8C3A_426

Geometric discrepancy: 0.093

The information below is about IL_8C3A_426

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.4

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

7OSA|1|18S|G|616
7OSA|1|18S|U|617
7OSA|1|18S|U|618
7OSA|1|18S|A|619
7OSA|1|18S|A|620
7OSA|1|18S|A|621
7OSA|1|18S|A|622
*
7OSA|1|18S|U|1104
7OSA|1|18S|C|1105

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS26

40S ribosomal protein S26

Chain uS12

40S ribosomal protein S23