IL_7OSA_044

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUG*UUA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_044 not in the Motif Atlas

Geometric match to IL_4V88_433

Geometric discrepancy: 0.1346

The information below is about IL_4V88_433

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7OSA|1|18S|U|893
7OSA|1|18S|U|894
7OSA|1|18S|G|895
*
7OSA|1|18S|U|917
7OSA|1|18S|U|918
7OSA|1|18S|A|919

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS1

40S ribosomal protein S1

Chain uL2

60S ribosomal protein L2-B

Chain uS11

40S ribosomal protein S14-A