IL_7OSA_055
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CCU*GCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_055 not in the Motif Atlas
- Homologous match to IL_8P9A_432
- Geometric discrepancy: 0.0861
- The information below is about IL_8P9A_432
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
7OSA|1|18S|C|1173
7OSA|1|18S|C|1174
7OSA|1|18S|U|1175
*
7OSA|1|18S|G|1464
7OSA|1|18S|C|1465
7OSA|1|18S|G|1466
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain PSIT
- Transfer RNA; tRNA
- Chain eS19
- 40S ribosomal protein S19-A
- Chain uS10
- 40S ribosomal protein S20
- Chain uS13
- 40S ribosomal protein S18-B
- Chain uS9
- BJ4_G0008010.mRNA.1.CDS.1
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