IL_7OSA_066

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AAUAG*CUUCU

Length

10 nucleotides

Bulged bases

7OSA|1|18S|A|1346, 7OSA|1|18S|U|1347

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_066 not in the Motif Atlas

Homologous match to IL_8CRE_459

Geometric discrepancy: 0.3269

The information below is about IL_8CRE_459

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSA|1|18S|A|1345
7OSA|1|18S|A|1346
7OSA|1|18S|U|1347
7OSA|1|18S|A|1348
7OSA|1|18S|G|1349
*
7OSA|1|18S|C|1376
7OSA|1|18S|U|1377
7OSA|1|18S|U|1378
7OSA|1|18S|C|1379
7OSA|1|18S|U|1380

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain uS10

40S ribosomal protein S20

Chain uS9

BJ4_G0008010.mRNA.1.CDS.1