IL_7OSA_068
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CUAU*AUGGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_068 not in the Motif Atlas
- Geometric match to IL_5J7L_053
- Geometric discrepancy: 0.3798
- The information below is about IL_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42032.1
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
7OSA|1|18S|C|1389
7OSA|1|18S|U|1390
7OSA|1|18S|A|1391
7OSA|1|18S|U|1392
*
7OSA|1|18S|A|1406
7OSA|1|18S|U|1407
7OSA|1|18S|G|1408
7OSA|1|18S|G|1409
7OSA|1|18S|A|1410
7OSA|1|18S|A|1411
7OSA|1|18S|G|1412
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain RACK
- BJ4_G0022010.mRNA.1.CDS.1
- Chain eS17
- BJ4_G0020710.mRNA.1.CDS.1
- Chain uS7
- Rps5p
- Chain uS9
- BJ4_G0008010.mRNA.1.CDS.1
Coloring options: