IL_7OSA_086

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CC*GCG

Length

5 nucleotides

Bulged bases

7OSA|1|58S|C|151

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_086 not in the Motif Atlas

Homologous match to IL_8P9A_231

Geometric discrepancy: 0.1186

The information below is about IL_8P9A_231

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_61258.15

Basepair signature

cWW-L-cWW

Number of instances in this motif group

41

Unit IDs

7OSA|1|25S|C|7
7OSA|1|25S|C|8
*
7OSA|1|58S|G|150
7OSA|1|58S|C|151
7OSA|1|58S|G|152

Current chains

Chain 25S

25S rRNA

Chain 58S

5.8S rRNA

Nearby chains

Chain eL15

60S ribosomal protein L15-A

Chain eL8

60S ribosomal protein L8-A

Chain uL23

60S ribosomal protein L25