IL_7OSA_088
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CC*GAG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_088 not in the Motif Atlas
- Homologous match to IL_8P9A_233
- Geometric discrepancy: 0.1468
- The information below is about IL_8P9A_233
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_90729.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 30
Unit IDs
7OSA|1|25S|C|27
7OSA|1|25S|C|28
*
7OSA|1|25S|G|56
7OSA|1|25S|A|57
7OSA|1|25S|G|58
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain 58S
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain eL13
- 60S ribosomal protein L13
- Chain eL15
- 60S ribosomal protein L15-A
- Chain eL37
- Ribosomal protein L37
- Chain uL29
- BJ4_G0044250.mRNA.1.CDS.1
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