IL_7OSA_090
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CUUAGUAA*UGAAGCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_090 not in the Motif Atlas
- Homologous match to IL_8P9A_235
- Geometric discrepancy: 0.0887
- The information below is about IL_8P9A_235
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_65594.1
- Basepair signature
- cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OSA|1|25S|C|82
7OSA|1|25S|U|83
7OSA|1|25S|U|84
7OSA|1|25S|A|85
7OSA|1|25S|G|86
7OSA|1|25S|U|87
7OSA|1|25S|A|88
7OSA|1|25S|A|89
*
7OSA|1|25S|U|97
7OSA|1|25S|G|98
7OSA|1|25S|A|99
7OSA|1|25S|A|100
7OSA|1|25S|G|101
7OSA|1|25S|C|102
7OSA|1|25S|G|103
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain eL13
- 60S ribosomal protein L13
- Chain eL15
- 60S ribosomal protein L15-A
- Chain eL18
- BJ4_G0033900.mRNA.1.CDS.1
- Chain eL42
- BJ4_G0001880.mRNA.1.CDS.1
- Chain uL15
- 60S ribosomal protein L28
Coloring options: