3D structure

PDB id
7OSA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
UG*UUUGUA
Length
8 nucleotides
Bulged bases
7OSA|1|25S|U|252
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7OSA_094 not in the Motif Atlas
Geometric match to IL_5TBW_010
Geometric discrepancy: 0.3709
The information below is about IL_5TBW_010
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_37379.1
Basepair signature
cWW-L-cWW-L-L
Number of instances in this motif group
1

Unit IDs

7OSA|1|25S|U|169
7OSA|1|25S|G|170
*
7OSA|1|25S|U|248
7OSA|1|25S|U|249
7OSA|1|25S|U|250
7OSA|1|25S|G|251
7OSA|1|25S|U|252
7OSA|1|25S|A|253

Current chains

Chain 25S
25S rRNA

Nearby chains

Chain eL13
60S ribosomal protein L13
Chain uL29
BJ4_G0044250.mRNA.1.CDS.1

Coloring options:


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