IL_7OSA_094

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UG*UUUGUA

Length

8 nucleotides

Bulged bases

7OSA|1|25S|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_094 not in the Motif Atlas

Geometric match to IL_5TBW_010

Geometric discrepancy: 0.3709

The information below is about IL_5TBW_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37379.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

1

Unit IDs

7OSA|1|25S|U|169
7OSA|1|25S|G|170
*
7OSA|1|25S|U|248
7OSA|1|25S|U|249
7OSA|1|25S|U|250
7OSA|1|25S|G|251
7OSA|1|25S|U|252
7OSA|1|25S|A|253

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL13

60S ribosomal protein L13

Chain uL29

BJ4_G0044250.mRNA.1.CDS.1