IL_7OSA_103
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGAUAAAUC*GGAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 7OSA|1|25S|A|519, 7OSA|1|25S|U|520
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_103 not in the Motif Atlas
- Homologous match to IL_8P9A_247
- Geometric discrepancy: 0.0809
- The information below is about IL_8P9A_247
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58126.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OSA|1|25S|G|517
7OSA|1|25S|G|518
7OSA|1|25S|A|519
7OSA|1|25S|U|520
7OSA|1|25S|A|521
7OSA|1|25S|A|522
7OSA|1|25S|A|523
7OSA|1|25S|U|524
7OSA|1|25S|C|525
*
7OSA|1|25S|G|567
7OSA|1|25S|G|568
7OSA|1|25S|A|569
7OSA|1|25S|A|570
7OSA|1|25S|U|571
7OSA|1|25S|A|572
7OSA|1|25S|C|573
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain eL14
- 60S ribosomal protein L14-A
- Chain eL20
- 60S ribosomal protein L20
- Chain uL30
- 60S ribosomal protein L7-A
- Chain uL4
- BJ4_G0008850.mRNA.1.CDS.1
Coloring options: