IL_7OSA_106
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUUUG*CAUAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_106 not in the Motif Atlas
- Homologous match to IL_8P9A_250
- Geometric discrepancy: 0.1
- The information below is about IL_8P9A_250
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74367.1
- Basepair signature
- cWW-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OSA|1|25S|G|680
7OSA|1|25S|U|681
7OSA|1|25S|U|682
7OSA|1|25S|U|683
7OSA|1|25S|G|684
*
7OSA|1|25S|C|696
7OSA|1|25S|A|697
7OSA|1|25S|U|698
7OSA|1|25S|A|699
7OSA|1|25S|C|700
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain eL13
- 60S ribosomal protein L13
- Chain eL15
- 60S ribosomal protein L15-A
- Chain uL15
- 60S ribosomal protein L28
- Chain uL4
- BJ4_G0008850.mRNA.1.CDS.1
Coloring options: