IL_7OSA_108

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

7OSA|1|25S|A|780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_108 not in the Motif Atlas

Homologous match to IL_8P9A_252

Geometric discrepancy: 0.1411

The information below is about IL_8P9A_252

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

130

Unit IDs

7OSA|1|25S|C|752
7OSA|1|25S|C|753
*
7OSA|1|25S|G|779
7OSA|1|25S|A|780
7OSA|1|25S|G|781

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL18

BJ4_G0033900.mRNA.1.CDS.1

Chain eL29

60S ribosomal protein L29

Chain uL15

60S ribosomal protein L28