IL_7OSA_132
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGCCGGAA*UA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_132 not in the Motif Atlas
- Homologous match to IL_8P9A_277
- Geometric discrepancy: 0.0663
- The information below is about IL_8P9A_277
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_07396.1
- Basepair signature
- cWW-L-cWW-L-L-R-cHH
- Number of instances in this motif group
- 3
Unit IDs
7OSA|1|25S|U|1173
7OSA|1|25S|G|1174
7OSA|1|25S|C|1175
7OSA|1|25S|C|1176
7OSA|1|25S|G|1177
7OSA|1|25S|G|1178
7OSA|1|25S|A|1179
7OSA|1|25S|A|1180
*
7OSA|1|25S|U|1325
7OSA|1|25S|A|1326
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain eL20
- 60S ribosomal protein L20
- Chain eL33
- BJ4_G0025510.mRNA.1.CDS.1
- Chain uL13
- 60S ribosomal protein L16-A
- Chain uL30
- 60S ribosomal protein L7-A
Coloring options: