IL_7OSA_141
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAG*CG
- Length
- 5 nucleotides
- Bulged bases
- 7OSA|1|25S|A|1386
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_141 not in the Motif Atlas
- Homologous match to IL_8P9A_286
- Geometric discrepancy: 0.1253
- The information below is about IL_8P9A_286
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 130
Unit IDs
7OSA|1|25S|C|1385
7OSA|1|25S|A|1386
7OSA|1|25S|G|1387
*
7OSA|1|25S|C|1420
7OSA|1|25S|G|1421
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain 58S
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain eL32
- HN1_G0013350.mRNA.1.CDS.1
- Chain eL6
- 60S ribosomal protein L6
- Chain uL4
- BJ4_G0008850.mRNA.1.CDS.1
Coloring options: