IL_7OSA_143

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UAG*CG

Length

5 nucleotides

Bulged bases

7OSA|1|25S|A|1399

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_143 not in the Motif Atlas

Homologous match to IL_8P9A_288

Geometric discrepancy: 0.0808

The information below is about IL_8P9A_288

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

7OSA|1|25S|U|1398
7OSA|1|25S|A|1399
7OSA|1|25S|G|1400
*
7OSA|1|25S|C|1411
7OSA|1|25S|G|1412

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain 58S

5.8S ribosomal RNA; 5.8S rRNA

Chain eL32

HN1_G0013350.mRNA.1.CDS.1

Chain eL6

60S ribosomal protein L6