IL_7OSA_154

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUAAC*GGAAGA

Length

11 nucleotides

Bulged bases

7OSA|1|25S|G|1751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_154 not in the Motif Atlas

Homologous match to IL_8P9A_299

Geometric discrepancy: 0.0877

The information below is about IL_8P9A_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25943.1

Basepair signature

cWW-tWH-tHH-tHS-cWW

Number of instances in this motif group

5

Unit IDs

7OSA|1|25S|U|1694
7OSA|1|25S|U|1695
7OSA|1|25S|A|1696
7OSA|1|25S|A|1697
7OSA|1|25S|C|1698
*
7OSA|1|25S|G|1747
7OSA|1|25S|G|1748
7OSA|1|25S|A|1749
7OSA|1|25S|A|1750
7OSA|1|25S|G|1751
7OSA|1|25S|A|1752

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL34

60S ribosomal protein L34-A

Chain eL38

BJ4_G0032190.mRNA.1.CDS.1