IL_7OSA_155

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUAUCA*UCUUAUG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_155 not in the Motif Atlas

Homologous match to IL_8P9A_300

Geometric discrepancy: 0.1134

The information below is about IL_8P9A_300

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_23038.1

Basepair signature

cWW-L-R-tWH-L-R-L-cWW-cWW

Number of instances in this motif group

2

Unit IDs

7OSA|1|25S|U|1702
7OSA|1|25S|U|1703
7OSA|1|25S|A|1704
7OSA|1|25S|U|1705
7OSA|1|25S|C|1706
7OSA|1|25S|A|1707
*
7OSA|1|25S|U|1737
7OSA|1|25S|C|1738
7OSA|1|25S|U|1739
7OSA|1|25S|U|1740
7OSA|1|25S|A|1741
7OSA|1|25S|U|1742
7OSA|1|25S|G|1743

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL34

60S ribosomal protein L34-A