IL_7OSA_166
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGAUGG*UGUUGACG
- Length
- 14 nucleotides
- Bulged bases
- 7OSA|1|25S|U|2159, 7OSA|1|25S|U|2175, 7OSA|1|25S|C|2179
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OSA_166 not in the Motif Atlas
- Homologous match to IL_8P9A_311
- Geometric discrepancy: 0.0658
- The information below is about IL_8P9A_311
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20047.1
- Basepair signature
- cWW-tSH-tWH-cSH-cHW-cWH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OSA|1|25S|C|2156
7OSA|1|25S|G|2157
7OSA|1|25S|A|2158
7OSA|1|25S|U|2159
7OSA|1|25S|G|2160
7OSA|1|25S|G|2161
*
7OSA|1|25S|U|2173
7OSA|1|25S|G|2174
7OSA|1|25S|U|2175
7OSA|1|25S|U|2176
7OSA|1|25S|G|2177
7OSA|1|25S|A|2178
7OSA|1|25S|C|2179
7OSA|1|25S|G|2180
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain 18S
- Small subunit ribosomal RNA; SSU rRNA
- Chain eL43
- 60S ribosomal protein L43-A
- Chain uL2
- 60S ribosomal protein L2-B
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