IL_7OSA_170

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAAUG*CGC

Length

8 nucleotides

Bulged bases

7OSA|1|25S|A|2207

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OSA_170 not in the Motif Atlas

Geometric match to IL_8C3A_508

Geometric discrepancy: 0.3786

The information below is about IL_8C3A_508

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_07195.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

7OSA|1|25S|G|2206
7OSA|1|25S|A|2207
7OSA|1|25S|A|2208
7OSA|1|25S|U|2209
7OSA|1|25S|G|2210
*
7OSA|1|25S|C|2235
7OSA|1|25S|G|2236
7OSA|1|25S|C|2237

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain 18S

Small subunit ribosomal RNA; SSU rRNA

Chain PSIT

Transfer RNA; tRNA

Chain uL2

60S ribosomal protein L2-B